Software

A statistics library implementing functions for common probability distributions. Written in the Zig programming language. [GitHub]

Empirical Bayes genotyping of biallelic SNPs in polyploids. [GitHub :: docs]

Hybridization detection with convolutional neural networks. [GitHub :: docs]

Detection of hybridization in phylogenomic data sets using phylogenetic invariants. [PyPI :: GitHub :: Docker :: docs]

Automated processing of double-barcoded PCR amplicons. [GitHub :: Docker :: docs]

Estimating quartet concordance factors from multilocus sequence data for species tree and network inference. [GitHub :: docs]

An R package for Bayesian population genomics in autopolyploids. [CRAN :: GitHub :: docs]

Install from CRAN: install.packages("polyfreqs").
The latest developmental version can also be installed directly from GitHub using the devtools package: devtools::install_github("pblischak/polyfreqs").